Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs78683437 chr10:81928168 C/T 2.14E-6 521 38.83 50.07 3.93 KM Plot
KIRC rs78797820 chr21:44254185 C/T 2.1E-7 516 41.13 31.75 7.18 KM Plot
KIRC rs78805756 chr6:165343627 G/C 4.15E-5 523 39.62 41.53 15.83 KM Plot
KIRC rs79089926 chr3:48348564 A/C 3.27E-5 523 39.62 41.27 19.13 KM Plot
KIRC rs79111847 chr8:67271690 C/T 0 524 39.38 40 0.6 KM Plot
KIRC rs79225202 chr11:34797803 A/C 1.49E-7 522 40 38.47 3.3 KM Plot
KIRC rs7928320 chr11:116942753 C/T 5.95E-6 525 42.47 30.3 4.57 KM Plot
KIRC rs79310258 chr3:48259667 C/G 6.5E-5 514 39.7 41.27 21.12 KM Plot
KIRC rs79356770 chr21:44316724 G/A 8.24E-13 517 42.47 34.87 3.37 KM Plot
KIRC rs7938962 chr11:34964636 T/C 2.6E-12 525 42.27 26.22 3.67 KM Plot
KIRC rs79430710 chr16:86609111 T/A 0 519 39.7 41.47 2.12 KM Plot
KIRC rs79511125 chr21:44331615 G/A 6.94E-10 514 42.47 33.07 7.18 KM Plot
KIRC rs79649442 chr4:16215919 A/G 3.2E-6 527 38.95 46.8 8.22 KM Plot
KIRC rs79753724 chr11:34772616 T/A 1.5E-7 522 40 38.47 3.3 KM Plot
KIRC rs79787271 chr10:9943031 A/T 4.24E-6 519 39.7 38 3.67 KM Plot